MeshFromSphericalFunctionTessellatedSamples
===========================================

.. code-block:: none

  
  USAGE: 
  
     MeshFromSphericalFunctionTessellatedSamples  [--returnparameterfile
                                          <std::string>]
                                          [--processinformationaddress
                                          <std::string>] [--xml] [--echo]
                                          [--debug] [--st] [--nolighting]
                                          [--nonormal] [--zoom <double>]
                                          [--png <std::string>] [--bg
                                          <std::vector<double>>] [--angle
                                          <std::vector<double>>] [--size
                                          <std::vector<int>>] [--colorscheme
                                          <DIRECTION|MAGNITUDE>]
                                          [--basicshape <TETRAHEDRON
                                          |OCTAHEDRON|ICOSAHEDRON>]
                                          [--tessorder <int>] [--scale
                                          <double>] [--slice
                                          <std::vector<int>>] [--box
                                          <std::vector<int>>] [--flip
                                          <std::vector<int>>] [--pow
                                          <double>] [--nostretch]
                                          [--normalize <NONE|MIN_MAX|UNIT_MAX
                                          |UNIT_INTEGRAL>] [--removenegative]
                                          [-o <std::string>] [--] [--version]
                                          [-h] <std::string> <std::string>
  
  
  Where: 
  
     --returnparameterfile <std::string>
       Filename in which to write simple return parameters (int, float,
       int-vector, etc.) as opposed to bulk return parameters (image,
       geometry, transform, measurement, table).
  
     --processinformationaddress <std::string>
       Address of a structure to store process information (progress, abort,
       etc.). (value: 0)
  
     --xml
       Produce xml description of command line arguments (value: 0)
  
     --echo
       Echo the command line arguments (value: 0)
  
     --debug
       debug (value: 0)
  
     --st
       Use single thread. (value: 0)
  
     --nolighting
       Set LightingOff. (value: 0)
  
     --nonormal
       Do not use vtkPolyDataNormals. (value: 0)
  
     --zoom <double>
       zoom factor. Used when visualzing the vtk file.
  
     --png <std::string>
       output png file. Used when visualzing the vtk file.
  
     --bg <std::vector<double>>
       background color for the window (value: 0,0,0)
  
     --angle <std::vector<double>>
       azimuth,elevation. Used when visualzing the vtk file. (value: 0.0,0.0)
  
     --size <std::vector<int>>
       window size. Used when visualzing the vtk file. (value: 600,600)
  
     --colorscheme <DIRECTION|MAGNITUDE>
       Color scheme. (value: DIRECTION)
  
     --basicshape <TETRAHEDRON|OCTAHEDRON|ICOSAHEDRON>
       Basic shape for subdivision. (value: ICOSAHEDRON)
  
     --tessorder <int>
       Tessellation order. (value: 4)
  
     --scale <double>
       Scale factor. (value: 1)
  
     --slice <std::vector<int>>
       coordinates for coronal, sagittal and transverse views. When -1 is
       used for x/y/z, then the voxel is visible in the x/y/z-axis. (value:
       -1,-1,-1)
  
     --box <std::vector<int>>
       only generate mesh from a given box (x0,x1,y0,y1,z0,z1). When -1 is
       used, then x0/y0/z0 will be 0, x1/y1/z1 will be the maximal number in
       the x/y/z-axis. (value: -1,-1,-1,-1,-1,-1)
  
     --flip <std::vector<int>>
       Flip x/y/z-axis for spherical functions. 1 means flip, 0 means
       no-flip. (value: 0,0,0)
  
     --pow <double>
       Power factor. (value: 1)
  
     --nostretch
       If it is set, the mesh in each voxel is a sphere and the values of the
       spherical function are only for coloring. (value: 0)
  
     --normalize <NONE|MIN_MAX|UNIT_MAX|UNIT_INTEGRAL>
       Perform normalization after removing negative values (if set); NONE:
       No normalization; MIN_MAX: Min-max normalization; UNIT_MAX: Unit
       maximum; UNIT_INTEGRATION: Unit integration. (value: NONE)
  
     --removenegative
       Remove negative values if set. (value: 0)
  
     -o <std::string>,  --output <std::string>
       Output vtk file. If it is not set, visualize the vtk file. (value: "")
  
     --,  --ignore_rest
       Ignores the rest of the labeled arguments following this flag.
  
     --version
       Displays version information and exits.
  
     -h,  --help
       Displays usage information and exits.
  
     <std::string>
       (required)  Input file.
  
     <std::string>
       (required)  text file which contains orientations for spherical
       samples.         It is from a tessellation in whole sphere or a
       hemisphere.       The sample order can be different from stored
       tessellation.
  
  
     Description: Create a mesh from spherical samples using tessellation.
  
     Examples: 
  
     MeshFromSphericalFunctionTessellatedSamples eapTrue_r0.015.nii.gz -o
     eapTrue_r0.015_vis.vtk ../directions_t4.txt  --scale 1e-5 
  
     MeshFromSphericalFunctionTessellatedSamples eapTrue_r0.015.nii.gz
     ../directions_t4.txt  --scale 1e-5 
  
     MeshFromSphericalFunctionTessellatedSamples odfTrue.nii.gz -o
     odfTrue_vis.vtk ../directions_t4.txt  --scale 1.5
  
     Author(s): Jian Cheng (jian.cheng.1983@gmail.com)
  
     Acknowledgements: Thank you everyone.