MeshFromTracts
==============

.. code-block:: none

  
  USAGE: 
  
     MeshFromTracts  [--returnparameterfile <std::string>]
                     [--processinformationaddress <std::string>] [--xml]
                     [--echo] [--debug] [-p] [--nonormal] [--zoom <double>]
                     [--png <std::string>] [--angle <std::vector<double>>]
                     [--size <std::vector<int>>] [--flip <std::vector<int>>]
                     [--scalarimage <std::string>] [--scalarrange
                     <std::vector<double>>] [--radius <double>] [--color
                     <std::vector<int>>] [--colorscheme <FIXED|DIRECTION
                     |MEAN_DIRECTION|END_POINTS|IMAGE|SCALARS|PROPERTY>] [-o
                     <std::string>] [--] [--version] [-h] <std::string>
  
  
  Where: 
  
     --returnparameterfile <std::string>
       Filename in which to write simple return parameters (int, float,
       int-vector, etc.) as opposed to bulk return parameters (image,
       geometry, transform, measurement, table).
  
     --processinformationaddress <std::string>
       Address of a structure to store process information (progress, abort,
       etc.). (value: 0)
  
     --xml
       Produce xml description of command line arguments (value: 0)
  
     --echo
       Echo the command line arguments (value: 0)
  
     --debug
       debug (value: 0)
  
     -p,  --progress
       show progress of processing (value: 0)
  
     --nonormal
       Do not use vtkPolyDataNormals. (value: 0)
  
     --zoom <double>
       zoom factor. Used when visualzing the vtk file.
  
     --png <std::string>
       output png file. Used when visualzing the vtk file.
  
     --angle <std::vector<double>>
       azimuth,elevation. Used when visualzing the vtk file. (value: 0.0,0.0)
  
     --size <std::vector<int>>
       window size. Used when visualzing the vtk file. (value: 600,600)
  
     --flip <std::vector<int>>
       Flip x/y/z-axis for spherical functions. 1 means flip, 0 means
       no-flip. (value: 0,0,0)
  
     --scalarimage <std::string>
       Input file. (value: "")
  
     --scalarrange <std::vector<double>>
       Range of scalar used for coloring. If they are -1.0, then use minimal
       and maximal values. (value: -1.0,-1.0)
  
     --radius <double>
       Tube radius. If it is negative or zero, use lines instead of tubes.
       (value: 0.2)
  
     --color <std::vector<int>>
       Use fixed color for peaks when --colorscheme FIXED is set. (value: 255
       ,255,0)
  
     --colorscheme <FIXED|DIRECTION|MEAN_DIRECTION|END_POINTS|IMAGE|SCALARS
        |PROPERTY>
       Color scheme. (value: DIRECTION)
  
     -o <std::string>,  --output <std::string>
       Output vtk file. If it is not set, visualize the vtk file. (value: "")
  
     --,  --ignore_rest
       Ignores the rest of the labeled arguments following this flag.
  
     --version
       Displays version information and exits.
  
     -h,  --help
       Displays usage information and exits.
  
     <std::string>
       (required)  Input file.
  
  
     Description: Create a mesh from fiber tracts for visualization.
  
     Examples: 
  
     MeshFromTracts tracts.trk -o tracts_vis.vtk --colorscheme DIRECTION  
  
     MeshFromTracts tracts.trk -o tracts_vis.vtk --colorscheme DIRECTION
     --radius 0.2
  
     Author(s): Jian Cheng (jian.cheng.1983@gmail.com)
  
     Acknowledgements: Thank you everyone.