#include <itkDWIGeneratorBase.h>

Inheritance diagram for itk::DWIGeneratorBase< TOutputImage, TScalarImage >:

Collaboration diagram for itk::DWIGeneratorBase< TOutputImage, TScalarImage >:

Detailed Description

template<class TOutputImage, class TScalarImage = Image<double,3>>
class itk::DWIGeneratorBase< TOutputImage, TScalarImage >

Generate DWI data based on provided parameter file.

Author: Jian Cheng (jian..nosp@m.chen.nosp@m.g.198.nosp@m.3@gm.nosp@m.ail.c.nosp@m.om)

Definition at line 40 of file itkDWIGeneratorBase.h.

Public Types
typedef CylinderModelType::Pointer	CylinderModelPointer

typedef CylinderModelGenerator< double >	CylinderModelType

typedef std::vector< DiffusionParameterValuesType >	DiffusionParameterContainerType

typedef std::vector< double >	DiffusionParameterValuesType

typedef utl_shared_ptr< MatrixType >	MatrixPointer

typedef utl::NDArray< PrecisionType, 2 >	MatrixType

enum	ModelType { SYMMETRICAL_TENSOR_IN_CARTESIAN_COORDS =0, SYMMETRICAL_TENSOR_IN_SPHERICAL_COORDS, TENSOR_IN_EULER_ANGLES, CYLINDER_SPHERICAL_MODEL }

typedef OutputImageType::DirectionType	OutputImageDirectionType

typedef OutputImageType::IndexType	OutputImageIndexType

typedef OutputImageType::InternalPixelType	OutputImageInternalPixelType

typedef OutputImageType::PixelType	OutputImagePixelType

typedef OutputImageType::Pointer	OutputImagePointer

typedef OutputImageType::PointType	OutputImagePointType

typedef OutputImageType::RegionType	OutputImageRegionType

typedef OutputImageType::SizeType	OutputImageSizeType

typedef OutputImageType::SpacingType	OutputImageSpacingType

typedef TOutputImage	OutputImageType

typedef SmartPointer< Self >	Pointer

typedef double	PrecisionType

typedef SamplingSchemeQSpaceType::Pointer	SamplingSchemeQSpacePointer

typedef SamplingSchemeQSpace< double >	SamplingSchemeQSpaceType

typedef SamplingSchemeRSpaceType::Pointer	SamplingSchemeRSpacePointer

typedef SamplingScheme3D< double >	SamplingSchemeRSpaceType

typedef ScalarImageType::Pointer	ScalarImagePointer

typedef TScalarImage	ScalarImageType

typedef DWIGeneratorBase	Self

typedef utl_shared_ptr< STDVectorType >	STDVectorPointer

typedef std::vector< PrecisionType >	STDVectorType

typedef ImageSource< TOutputImage >	Superclass

typedef utl::NDArray< PrecisionType, 1 >	VectorType

Public Member Functions
ScalarImageType *	GetB0Image ()

virtual double	GetB0Scale ()

OutputImageType *	GetDWIImage ()

OutputImageType *	GetEAPImage ()

virtual int	GetMaxNumberOfPeaks ()

virtual ModelType	GetModelType () const

ScalarImageType *	GetMSDImage ()

virtual const char *	GetNameOfClass () const

virtual double	GetNoiseSigma ()

unsigned int	GetNumberOfQSpaceSamples () const

unsigned int	GetNumberOfRSpaceSamples () const

OutputImageType *	GetODFImage ()

virtual unsigned int	GetODFOrder ()

virtual OutputImageSizeType	GetOutputSize ()

OutputImageType *	GetPeakImage ()

virtual PeakType	GetPeakType ()

ScalarImageType *	GetRTOImage ()

virtual double	GetSNR ()

	itkGetObjectMacro (SamplingSchemeQSpace, SamplingSchemeQSpaceType)

	itkGetObjectMacro (SamplingSchemeRSpace, SamplingSchemeRSpaceType)

	itkGetObjectMacro (CylinderModel, CylinderModelType)

	itkSetGetBooleanMacro (IsOutputDWI)

	itkSetGetBooleanMacro (IsOutputEAP)

	itkSetGetBooleanMacro (IsOutputODF)

	itkSetGetBooleanMacro (IsOutputRTO)

	itkSetGetBooleanMacro (IsOutputMSD)

virtual void	SetB0Scale (double _arg)

virtual void	SetCylinderModel (CylinderModelType *_arg)

virtual void	SetMaxNumberOfPeaks (int _arg)

virtual void	SetModelType (const ModelType _arg)

virtual void	SetNoiseSigma (double _arg)

virtual void	SetODFOrder (unsigned int _arg)

virtual void	SetOutputSize (OutputImageSizeType _arg)

virtual void	SetPeakType (PeakType _arg)

virtual void	SetSamplingSchemeQSpace (SamplingSchemeQSpaceType *_arg)

virtual void	SetSamplingSchemeRSpace (SamplingSchemeRSpaceType *_arg)

virtual void	SetSNR (double _arg)

Static Public Attributes
static const unsigned int	OutputImageDimension = OutputImageType::ImageDimension

Protected Member Functions
virtual void	AllocateOutputs () ITK_OVERRIDE

	DWIGeneratorBase ()

void	GenerateData () ITK_OVERRIDE=0

virtual void	Initialization ()

LightObject::Pointer	InternalClone () const ITK_OVERRIDE

void	PrintSelf (std::ostream &os, Indent indent) const ITK_OVERRIDE

	~DWIGeneratorBase ()

Protected Attributes
double	m_B0Scale

CylinderModelPointer	m_CylinderModel

bool	m_IsOutputDWI

bool	m_IsOutputEAP

bool	m_IsOutputMSD

bool	m_IsOutputODF

bool	m_IsOutputRTO

int	m_MaxNumberOfPeaks

ModelType	m_ModelType

double	m_NoiseSigma

unsigned int	m_ODFOrder

OutputImageDirectionType	m_OutputDirection

OutputImagePointType	m_OutputOrigin

OutputImageSizeType	m_OutputSize

OutputImageSpacingType	m_OutputSpacing

PeakType	m_PeakType

SamplingSchemeQSpacePointer	m_SamplingSchemeQSpace

SamplingSchemeRSpacePointer	m_SamplingSchemeRSpace

double	m_SNR

Private Member Functions
	DWIGeneratorBase (const Self &)

void	operator= (const Self &)

Member Typedef Documentation

template<class TOutputImage , class TScalarImage = Image<double,3>>

typedef CylinderModelType::Pointer itk::DWIGeneratorBase< TOutputImage, TScalarImage >::CylinderModelPointer

Definition at line 87 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

typedef CylinderModelGenerator<double> itk::DWIGeneratorBase< TOutputImage, TScalarImage >::CylinderModelType

Definition at line 86 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

typedef std::vector<DiffusionParameterValuesType> itk::DWIGeneratorBase< TOutputImage, TScalarImage >::DiffusionParameterContainerType

Definition at line 84 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

typedef std::vector<double> itk::DWIGeneratorBase< TOutputImage, TScalarImage >::DiffusionParameterValuesType

Some convenient typedefs for diffusion parameters.

Definition at line 83 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

typedef utl_shared_ptr<MatrixType > itk::DWIGeneratorBase< TOutputImage, TScalarImage >::MatrixPointer

Definition at line 78 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

typedef utl::NDArray<PrecisionType,2> itk::DWIGeneratorBase< TOutputImage, TScalarImage >::MatrixType

Definition at line 76 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

typedef OutputImageType::DirectionType itk::DWIGeneratorBase< TOutputImage, TScalarImage >::OutputImageDirectionType

Definition at line 61 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

typedef OutputImageType::IndexType itk::DWIGeneratorBase< TOutputImage, TScalarImage >::OutputImageIndexType

Definition at line 59 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

typedef OutputImageType::InternalPixelType itk::DWIGeneratorBase< TOutputImage, TScalarImage >::OutputImageInternalPixelType

Definition at line 64 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

typedef OutputImageType::PixelType itk::DWIGeneratorBase< TOutputImage, TScalarImage >::OutputImagePixelType

Definition at line 63 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

typedef OutputImageType::Pointer itk::DWIGeneratorBase< TOutputImage, TScalarImage >::OutputImagePointer

Definition at line 56 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

typedef OutputImageType::PointType itk::DWIGeneratorBase< TOutputImage, TScalarImage >::OutputImagePointType

Definition at line 60 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

typedef OutputImageType::RegionType itk::DWIGeneratorBase< TOutputImage, TScalarImage >::OutputImageRegionType

Definition at line 62 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

typedef OutputImageType::SizeType itk::DWIGeneratorBase< TOutputImage, TScalarImage >::OutputImageSizeType

Definition at line 57 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

typedef OutputImageType::SpacingType itk::DWIGeneratorBase< TOutputImage, TScalarImage >::OutputImageSpacingType

Definition at line 58 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

typedef TOutputImage itk::DWIGeneratorBase< TOutputImage, TScalarImage >::OutputImageType

Some convenient typedefs.

Definition at line 52 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

typedef SmartPointer<Self> itk::DWIGeneratorBase< TOutputImage, TScalarImage >::Pointer

Definition at line 46 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

typedef double itk::DWIGeneratorBase< TOutputImage, TScalarImage >::PrecisionType

Orientation Matrice Type

Definition at line 75 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

typedef SamplingSchemeQSpaceType::Pointer itk::DWIGeneratorBase< TOutputImage, TScalarImage >::SamplingSchemeQSpacePointer

Definition at line 90 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

typedef SamplingSchemeQSpace<double> itk::DWIGeneratorBase< TOutputImage, TScalarImage >::SamplingSchemeQSpaceType

Definition at line 89 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

typedef SamplingSchemeRSpaceType::Pointer itk::DWIGeneratorBase< TOutputImage, TScalarImage >::SamplingSchemeRSpacePointer

Definition at line 93 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

typedef SamplingScheme3D<double> itk::DWIGeneratorBase< TOutputImage, TScalarImage >::SamplingSchemeRSpaceType

Definition at line 92 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

typedef ScalarImageType::Pointer itk::DWIGeneratorBase< TOutputImage, TScalarImage >::ScalarImagePointer

Definition at line 72 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

typedef TScalarImage itk::DWIGeneratorBase< TOutputImage, TScalarImage >::ScalarImageType

B0 Image

Definition at line 71 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

typedef DWIGeneratorBase itk::DWIGeneratorBase< TOutputImage, TScalarImage >::Self

Standard class typedefs.

Definition at line 44 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

typedef utl_shared_ptr<STDVectorType> itk::DWIGeneratorBase< TOutputImage, TScalarImage >::STDVectorPointer

Definition at line 80 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

typedef std::vector<PrecisionType> itk::DWIGeneratorBase< TOutputImage, TScalarImage >::STDVectorType

Definition at line 79 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

typedef ImageSource<TOutputImage> itk::DWIGeneratorBase< TOutputImage, TScalarImage >::Superclass

Definition at line 45 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

typedef utl::NDArray<PrecisionType,1> itk::DWIGeneratorBase< TOutputImage, TScalarImage >::VectorType

Definition at line 77 of file itkDWIGeneratorBase.h.

Member Enumeration Documentation

template<class TOutputImage , class TScalarImage = Image<double,3>>

enum itk::DWIGeneratorBase::ModelType

Parameters

TENSOR_SYM_CARTESIAN	symmetric tensor with the principal direction (x,y,z) in Cartesian coordinates
TENSOR_SYM_SPHERICAL	symmetric tensor with the principal direction (theta,phi) in spherical coordinates
TENSOR	general tensor with three Eular angles
CYLINDER_SPHERICAL	cylinder spherical model with two spherical angles (theta,phi)

Enumerator
SYMMETRICAL_TENSOR_IN_CARTESIAN_COORDS
SYMMETRICAL_TENSOR_IN_SPHERICAL_COORDS
TENSOR_IN_EULER_ANGLES
CYLINDER_SPHERICAL_MODEL

Definition at line 100 of file itkDWIGeneratorBase.h.

Constructor & Destructor Documentation

template<class TOutputImage , class TScalarImage >

itk::DWIGeneratorBase< TOutputImage, TScalarImage >::DWIGeneratorBase ( )

protected

Definition at line 30 of file itkDWIGeneratorBase.hxx.

References itk::NXYZ, and itk::DWIGeneratorBase< TOutputImage, TScalarImage >::~DWIGeneratorBase().

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template<class TOutputImage , class TScalarImage >

itk::DWIGeneratorBase< TOutputImage, TScalarImage >::~DWIGeneratorBase ( )

protected

Definition at line 71 of file itkDWIGeneratorBase.hxx.

References itk::DWIGeneratorBase< TOutputImage, TScalarImage >::InternalClone().

Referenced by itk::DWIGeneratorBase< TOutputImage, TScalarImage >::DWIGeneratorBase().

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template<class TOutputImage , class TScalarImage = Image<double,3>>

itk::DWIGeneratorBase< TOutputImage, TScalarImage >::DWIGeneratorBase ( const Self & )

private

Member Function Documentation

template<class TOutputImage , class TScalarImage >

void itk::DWIGeneratorBase< TOutputImage, TScalarImage >::AllocateOutputs ( )

protectedvirtual

allocate all outputs

Definition at line 145 of file itkDWIGeneratorBase.hxx.

References itk::PeakContainerHelper::GetDimension(), itk::DWIGeneratorBase< TOutputImage, TScalarImage >::PrintSelf(), and utlShowPosition.

Referenced by itk::DWIGeneratorBase< TOutputImage, TScalarImage >::Initialization().

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template<class TOutputImage , class TScalarImage = Image<double,3>>

void itk::DWIGeneratorBase< TOutputImage, TScalarImage >::GenerateData ( )

protectedpure virtual

Implemented in itk::DWISingleVoxelGenerator< TOutputImage, TScalarImage >, and itk::DWIGenerator< TOutputImage, TScalarImage >.

template<class TOutputImage , class TScalarImage = Image<double,3>>

ScalarImageType* itk::DWIGeneratorBase< TOutputImage, TScalarImage >::GetB0Image ( )

inline

Get B0Image

Definition at line 159 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

virtual double itk::DWIGeneratorBase< TOutputImage, TScalarImage >::GetB0Scale ( )

virtual

template<class TOutputImage , class TScalarImage = Image<double,3>>

OutputImageType* itk::DWIGeneratorBase< TOutputImage, TScalarImage >::GetDWIImage ( )

inline

Definition at line 164 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

OutputImageType* itk::DWIGeneratorBase< TOutputImage, TScalarImage >::GetEAPImage ( )

inline

Definition at line 174 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

virtual int itk::DWIGeneratorBase< TOutputImage, TScalarImage >::GetMaxNumberOfPeaks ( )

virtual

template<class TOutputImage , class TScalarImage = Image<double,3>>

virtual ModelType itk::DWIGeneratorBase< TOutputImage, TScalarImage >::GetModelType ( ) const

virtual

template<class TOutputImage , class TScalarImage = Image<double,3>>

ScalarImageType* itk::DWIGeneratorBase< TOutputImage, TScalarImage >::GetMSDImage ( )

inline

Definition at line 188 of file itkDWIGeneratorBase.h.

References ITK_OVERRIDE.

template<class TOutputImage , class TScalarImage = Image<double,3>>

virtual const char* itk::DWIGeneratorBase< TOutputImage, TScalarImage >::GetNameOfClass ( ) const

virtual

Run-time type information (and related methods).

Reimplemented in itk::DWISingleVoxelGenerator< TOutputImage, TScalarImage >, and itk::DWIGenerator< TOutputImage, TScalarImage >.

template<class TOutputImage , class TScalarImage = Image<double,3>>

virtual double itk::DWIGeneratorBase< TOutputImage, TScalarImage >::GetNoiseSigma ( )

virtual

template<class TOutputImage , class TScalarImage = Image<double,3>>

unsigned int itk::DWIGeneratorBase< TOutputImage, TScalarImage >::GetNumberOfQSpaceSamples ( ) const

inline

Definition at line 131 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

unsigned int itk::DWIGeneratorBase< TOutputImage, TScalarImage >::GetNumberOfRSpaceSamples ( ) const

inline

Definition at line 136 of file itkDWIGeneratorBase.h.

References itkSetGetBooleanMacro.

template<class TOutputImage , class TScalarImage = Image<double,3>>

OutputImageType* itk::DWIGeneratorBase< TOutputImage, TScalarImage >::GetODFImage ( )

inline

Definition at line 169 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

virtual unsigned int itk::DWIGeneratorBase< TOutputImage, TScalarImage >::GetODFOrder ( )

virtual

template<class TOutputImage , class TScalarImage = Image<double,3>>

virtual OutputImageSizeType itk::DWIGeneratorBase< TOutputImage, TScalarImage >::GetOutputSize ( )

virtual

template<class TOutputImage , class TScalarImage = Image<double,3>>

OutputImageType* itk::DWIGeneratorBase< TOutputImage, TScalarImage >::GetPeakImage ( )

inline

Definition at line 179 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

virtual PeakType itk::DWIGeneratorBase< TOutputImage, TScalarImage >::GetPeakType ( )

virtual

template<class TOutputImage , class TScalarImage = Image<double,3>>

ScalarImageType* itk::DWIGeneratorBase< TOutputImage, TScalarImage >::GetRTOImage ( )

inline

Definition at line 184 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

virtual double itk::DWIGeneratorBase< TOutputImage, TScalarImage >::GetSNR ( )

virtual

template<class TOutputImage , class TScalarImage >

void itk::DWIGeneratorBase< TOutputImage, TScalarImage >::Initialization ( )

protectedvirtual

initialization, test

Reimplemented in itk::DWISingleVoxelGenerator< TOutputImage, TScalarImage >.

Definition at line 121 of file itkDWIGeneratorBase.hxx.

References itk::DWIGeneratorBase< TOutputImage, TScalarImage >::AllocateOutputs(), utlGlobalException, and utlShowPosition.

Referenced by itk::DWIGeneratorBase< TOutputImage, TScalarImage >::InternalClone().

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template<class TOutputImage , class TScalarImage >

LightObject::Pointer itk::DWIGeneratorBase< TOutputImage, TScalarImage >::InternalClone ( ) const

protected

Definition at line 78 of file itkDWIGeneratorBase.hxx.

References itk::DWIGeneratorBase< TOutputImage, TScalarImage >::Initialization().

Referenced by itk::DWIGeneratorBase< TOutputImage, TScalarImage >::~DWIGeneratorBase().

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template<class TOutputImage , class TScalarImage = Image<double,3>>

itk::DWIGeneratorBase< TOutputImage, TScalarImage >::itkGetObjectMacro	(	SamplingSchemeQSpace	,
		SamplingSchemeQSpaceType
	)

template<class TOutputImage , class TScalarImage = Image<double,3>>

itk::DWIGeneratorBase< TOutputImage, TScalarImage >::itkGetObjectMacro	(	SamplingSchemeRSpace	,
		SamplingSchemeRSpaceType
	)

template<class TOutputImage , class TScalarImage = Image<double,3>>

itk::DWIGeneratorBase< TOutputImage, TScalarImage >::itkGetObjectMacro	(	CylinderModel	,
		CylinderModelType
	)

template<class TOutputImage , class TScalarImage = Image<double,3>>

itk::DWIGeneratorBase< TOutputImage, TScalarImage >::itkSetGetBooleanMacro ( IsOutputDWI )

template<class TOutputImage , class TScalarImage = Image<double,3>>

itk::DWIGeneratorBase< TOutputImage, TScalarImage >::itkSetGetBooleanMacro ( IsOutputEAP )

template<class TOutputImage , class TScalarImage = Image<double,3>>

itk::DWIGeneratorBase< TOutputImage, TScalarImage >::itkSetGetBooleanMacro ( IsOutputODF )

template<class TOutputImage , class TScalarImage = Image<double,3>>

itk::DWIGeneratorBase< TOutputImage, TScalarImage >::itkSetGetBooleanMacro ( IsOutputRTO )

template<class TOutputImage , class TScalarImage = Image<double,3>>

itk::DWIGeneratorBase< TOutputImage, TScalarImage >::itkSetGetBooleanMacro ( IsOutputMSD )

template<class TOutputImage , class TScalarImage = Image<double,3>>

void itk::DWIGeneratorBase< TOutputImage, TScalarImage >::operator= ( const Self & )

private

template<class TOutputImage , class TScalarImage >

void itk::DWIGeneratorBase< TOutputImage, TScalarImage >::PrintSelf	(	std::ostream &	os,
		Indent	indent
	)		const

protected

Definition at line 251 of file itkDWIGeneratorBase.hxx.

References itk::PeakContainerHelper::GetString(), PrintVar1, and PrintVar2.

Referenced by itk::DWIGeneratorBase< TOutputImage, TScalarImage >::AllocateOutputs().

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template<class TOutputImage , class TScalarImage = Image<double,3>>

virtual void itk::DWIGeneratorBase< TOutputImage, TScalarImage >::SetB0Scale ( double _arg )

virtual

template<class TOutputImage , class TScalarImage = Image<double,3>>

virtual void itk::DWIGeneratorBase< TOutputImage, TScalarImage >::SetCylinderModel ( CylinderModelType * _arg )

virtual

template<class TOutputImage , class TScalarImage = Image<double,3>>

virtual void itk::DWIGeneratorBase< TOutputImage, TScalarImage >::SetMaxNumberOfPeaks ( int _arg )

virtual

template<class TOutputImage , class TScalarImage = Image<double,3>>

virtual void itk::DWIGeneratorBase< TOutputImage, TScalarImage >::SetModelType ( const ModelType _arg )

virtual

template<class TOutputImage , class TScalarImage = Image<double,3>>

virtual void itk::DWIGeneratorBase< TOutputImage, TScalarImage >::SetNoiseSigma ( double _arg )

virtual

Parameters

template<class TOutputImage , class TScalarImage = Image<double,3>>

virtual void itk::DWIGeneratorBase< TOutputImage, TScalarImage >::SetODFOrder ( unsigned int _arg )

virtual

template<class TOutputImage , class TScalarImage = Image<double,3>>

virtual void itk::DWIGeneratorBase< TOutputImage, TScalarImage >::SetOutputSize ( OutputImageSizeType _arg )

virtual

Image size with the same diffusion parameters in all voxels

template<class TOutputImage , class TScalarImage = Image<double,3>>

virtual void itk::DWIGeneratorBase< TOutputImage, TScalarImage >::SetPeakType ( PeakType _arg )

virtual

template<class TOutputImage , class TScalarImage = Image<double,3>>

virtual void itk::DWIGeneratorBase< TOutputImage, TScalarImage >::SetSamplingSchemeQSpace ( SamplingSchemeQSpaceType * _arg )

virtual

template<class TOutputImage , class TScalarImage = Image<double,3>>

virtual void itk::DWIGeneratorBase< TOutputImage, TScalarImage >::SetSamplingSchemeRSpace ( SamplingSchemeRSpaceType * _arg )

virtual

template<class TOutputImage , class TScalarImage = Image<double,3>>

virtual void itk::DWIGeneratorBase< TOutputImage, TScalarImage >::SetSNR ( double _arg )

virtual

Member Data Documentation

template<class TOutputImage , class TScalarImage = Image<double,3>>

double itk::DWIGeneratorBase< TOutputImage, TScalarImage >::m_B0Scale

protected

Definition at line 223 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

CylinderModelPointer itk::DWIGeneratorBase< TOutputImage, TScalarImage >::m_CylinderModel

protected

Definition at line 228 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

bool itk::DWIGeneratorBase< TOutputImage, TScalarImage >::m_IsOutputDWI

protected

Definition at line 211 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

bool itk::DWIGeneratorBase< TOutputImage, TScalarImage >::m_IsOutputEAP

protected

Definition at line 213 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

bool itk::DWIGeneratorBase< TOutputImage, TScalarImage >::m_IsOutputMSD

protected

Definition at line 215 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

bool itk::DWIGeneratorBase< TOutputImage, TScalarImage >::m_IsOutputODF

protected

Definition at line 212 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

bool itk::DWIGeneratorBase< TOutputImage, TScalarImage >::m_IsOutputRTO

protected

Definition at line 214 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

int itk::DWIGeneratorBase< TOutputImage, TScalarImage >::m_MaxNumberOfPeaks

protected

Definition at line 225 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

ModelType itk::DWIGeneratorBase< TOutputImage, TScalarImage >::m_ModelType

protected

Definition at line 222 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

double itk::DWIGeneratorBase< TOutputImage, TScalarImage >::m_NoiseSigma

protected

Definition at line 217 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

unsigned int itk::DWIGeneratorBase< TOutputImage, TScalarImage >::m_ODFOrder

protected

Definition at line 220 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

OutputImageDirectionType itk::DWIGeneratorBase< TOutputImage, TScalarImage >::m_OutputDirection

protected

Definition at line 233 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

OutputImagePointType itk::DWIGeneratorBase< TOutputImage, TScalarImage >::m_OutputOrigin

protected

Definition at line 232 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

OutputImageSizeType itk::DWIGeneratorBase< TOutputImage, TScalarImage >::m_OutputSize

protected

Definition at line 230 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

OutputImageSpacingType itk::DWIGeneratorBase< TOutputImage, TScalarImage >::m_OutputSpacing

protected

Definition at line 231 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

PeakType itk::DWIGeneratorBase< TOutputImage, TScalarImage >::m_PeakType

protected

Definition at line 226 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

SamplingSchemeQSpacePointer itk::DWIGeneratorBase< TOutputImage, TScalarImage >::m_SamplingSchemeQSpace

protected

Definition at line 207 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

SamplingSchemeRSpacePointer itk::DWIGeneratorBase< TOutputImage, TScalarImage >::m_SamplingSchemeRSpace

protected

Definition at line 209 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

double itk::DWIGeneratorBase< TOutputImage, TScalarImage >::m_SNR

protected

Definition at line 218 of file itkDWIGeneratorBase.h.

template<class TOutputImage , class TScalarImage = Image<double,3>>

const unsigned int itk::DWIGeneratorBase< TOutputImage, TScalarImage >::OutputImageDimension = OutputImageType::ImageDimension

static

Output image dimension

Definition at line 67 of file itkDWIGeneratorBase.h.

The documentation for this class was generated from the following files:

Modules/DWIProcessing/include/itkDWIGeneratorBase.h
Modules/DWIProcessing/include/itkDWIGeneratorBase.hxx

Detailed Description

template<class TOutputImage, class TScalarImage = Image<double,3>> class itk::DWIGeneratorBase< TOutputImage, TScalarImage >

Public Types

Public Member Functions

Static Public Attributes

Protected Member Functions

Protected Attributes

Private Member Functions

Member Typedef Documentation

Member Enumeration Documentation

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation

template<class TOutputImage, class TScalarImage = Image<double,3>>
class itk::DWIGeneratorBase< TOutputImage, TScalarImage >