Class List

Here are the classes, structs, unions and interfaces with brief descriptions:

[detail level 1234]

►Nitk
►NConcept
►CSameInteger
CConstraints
►NFunctor
CEQUAL
CLDIVIDE
CLINEAR
CLMINUS
CLPOWER
CMeanDiffusivityFromGHOTCoefficients	MD value from GHOT coefficients
CMultiplyByConstantMatrix
CMultiplyByConstantVector
CNLOG
CNormalizeVectorImageFunctor
CODFNormlizeFunctor
COuterProduct
CPLUS
CRDIVIDE
CRMINUS
CRotateSHCoefficients
CRPOWER
CSHCoefficientsFit	Fit SH coefficients from spherical function samples
CSHCoefficientsPower
CSHCoefficientsToGFA
CSPFScaleFromMeanDiffusivity
CTIMES
CAddNoiseToDWIImageFilter	Add noise to DWI data
CBasisMatrixGenerator	Generate basis matrix
CCastImageFileWriter	Writes image data, after casting, to a single file
CCastVectorImageFileWriter	Writes image data, after casting, to a single file
CCommandProgressUpdate	Observer for progress notification
CComposeVectorImageFilter	ComposeVectorImageFilter combine several vector images into a vector image
CCylinderModelGenerator	Cylinder Model
CDiffusionModelEstimationImageFilter	Base filter for estimation of diffusion models
CDiffusionModelEstimationInSphericalCoordinateImageFilter	Base filter for estimation of diffusion models in spherical coordinates
CDiffusionModelGenerator	Generate ground truth DWI/EAP/ODF ets from a given model
CDiffusionTensor	Tensor with some useful functions
CDiscreteBasisMatrixGenerator	Generate basis matrix
CDWIGenerator	Generate DWI data based on provided parameter file
CDWIGeneratorBase	Generate DWI data based on provided parameter file
CDWIReader	Load gradient file, b values and DWI files (with optional index file)
CDWISingleVoxelGenerator	Generate DWI data with the same diffusion parameter set for all voxels. If random mode is used, the diffusion parameters are randomly rotated
CDWIWriter	Write gradient file, b values and DWI files (with optional index file)
CFeaturesFromSPFImageFilter	Compute some features (DWI/EAP profile, ODFs, scalar indices) from SPF coefficients
CFiber
CFiberTracts
CFiberTractsReader
CFiberTractsWriter
CFunctorBaseVectorImageFilter	Implements vector-valued generic operation on one image
CFunctorFromStringImageFilter	Implements vector-valued generic operation on images with the same size
CFunctorHashTable	Use FunctorHashTable to accelerate evaluation of functions
CFunctorTableBase	Use FunctorTableBase to accelerate evaluation of functions
CGeneralizedHighOrderTensorImageFilter	Estimate the coefficients in GHOT model, which is used for md image estimation
CImageToVTKImageDataFilter	Converts an ITK image to VTK image data
CIterativeSolverBase	Base class for some optimization solvers using primal-dual updates
CL1RegularizedLeastSquaresFISTASolver	Solve least square problem with L1 regularization using FISTA
CL2RegularizedLeastSquaresSolver	Solve least square problem with L2 regularization
CMaskedImageToImageFilter	ImageToImageFilter with mask and threaded logger support
CMeanDiffusivityFromGHOTImageFilter	Compute mean diffusivity from GHOT coefficients
CMeshFromContinuousSphericalFunctionImageFilter	Compute mesh from continuous spherical function linearly represented by a set of bases
CMeshFromDiscreteFiberODFImageFilter	Compute mesh from discrete fiber ODF represented by a set of basis functions
CMeshFromFiberTractsFilter	Compute mesh from fibers
CMeshFromImageImageFilter	Compute mesh from SH coefficients
CMeshFromPeaksImageFilter	Generate a mesh from given peaks
CMeshFromSHCoefficientsImageFilter	Compute mesh from SH coefficients
CMeshFromSphericalFunctionImageFilter	Compute mesh from general spherical function
CMeshFromSphericalFunctionTessellatedSamplesImageFilter	Compute mesh from spherical samples in the pre-stored tessellated vertices
CMeshFromTensorImageFilter	Compute mesh from a tensor image
CMultiplyByConstantMatrixVectorImageFilter	In each vxoel, multiply the input vector by a matrix
CMultiplyByConstantVectorImageFilter	Multiply input pixels by a constant
CMultiVariableFunctorVectorImageFilter	Implements vector-valued generic operation on one image
CMultiVolumeImageToVectorImageFilter	Convert Image<TInputPixelType, VImageDimension+1> to VectorImage<TOutputPixelType, VImageDimension>
CNormalizeODFImageFilter	Normalize the input ODF such that the output ODF has unit integral. The input ODF can be represented using uniform spheircal samples or SH coefficients
CNormalizeVectorImageFilter	Pixel-wise vector normalization
CODFFromSPFImageFilter	Calculate ODFs from SPF coefficients
COuterProductVectorImageFilter	In each vxoel, multiply the input vector by a matrix
CPeakContainerHelper	VariableLengthVector to contain peaks with different storing types
CProfileFromSPFImageFilter	Calculate DWI/EAP profile from SPF coefficients
CRGBImageToVTKImageDataFilter	Converts an ITK image to VTK image data
CRotateSHCoefficientsImageFilter	Rotate SH coefficient to all input pixels
CSamplingScheme3D	This class describes sampling in a 3D space (Q space or R space)
CSamplingSchemeQSpace	This class describes sampling in Q space
CSamplingSchemeQSpace1OptEstimationFilter	Incremental estimation of single/multi-shell orientations
CSamplingSchemeQSpaceEstimationFilter	Base class for the filters to estimate the sampling scheme in Q-space
CSamplingSchemeQSpaceIMOCEstimationFilter	Estimation of single/multi-shell orientations using Iterative Maximum Overlap Construction (IMOC)
CSamplingSchemeQSpaceIncrementalEstimationFilter	Incremental estimation of single/multi-shell orientations
CSamplingSchemeQSpaceWriter	Write orientations and b values (single/multiple shells) into text files
CScalarMapFromSPFImageFilter	Calculate ODFs from SPF coefficients
CSHCoefficientsPowerImageFilter	In each vxoel, the input VectorImage is a SH coefficient vector which represents a spherical function. The output VectorImage is another SH coefficient vector whose spherical function is a power of the input function. In formula outputFunction = (inputFunction)^k, where k is a given order. When k==2, then we have closed form of the output SH coefficient vector. When k is not 2, we resample the input spherical function, power it, then refit it using SH basis
CSHCoefficientsRotation	Rotate SH coefficient vector by a given rotation matrix
CSHCoefficientsToGFAImageFilter	In each vxoel, calculate gfa from SH coefficients
CSlowPolyLineParametricPath	Represent a path of line segments through ND Space
CSolverBase	Base class for some optimization solvers using primal-dual updates
CSpamsWeightedLassoSolver	Solve weighted LASSO using spams
CSparseVector	Represents a sparse array
CSpatiallyDenseSparseVectorImage	An n-dimensional vector image with a sparse memory model
CSpatiallyDenseSparseVectorImageFileReader	Reads sparse image data from key and value files
CSpatiallyDenseSparseVectorImageFileReaderException	Base exception class for IO conflicts
CSpatiallyDenseSparseVectorImageFileWriter	Writes sparse vector image data to key and value files
CSpatiallyDenseSparseVectorImageNeighborhoodAccessorFunctor	Provides accessor interfaces to Access pixels and is meant to be used on pointers to pixels held by the Neighborhood class
CSpatiallyDenseSparseVectorImagePixelAccessor	Give access to partial aspects of a type
CSpatiallyDenseSparseVectorImagePixelAccessorFunctor	Provides accessor interfaces to Access pixels and is meant to be used by iterators
CSPFScaleFromMeanDiffusivityImageFilter	Compute SPF scale from mean diffusivity
CSphereTessellator	Tesselates a sphere via subdivision of tetrahedron, octahedron, or icosahedron
CSphericalHarmonicsGenerator	Generate complex and real Spherical Harmonic Basis
CSphericalPolarFourierEstimationImageFilter	Estimate the coeffcients of generalized Spherical Polar Fourier basis which can be separated into differe radial basis and sphercial basis
CSphericalPolarFourierGenerator	General SPF basis in radial part, SH basis in spherical part
CSphericalPolarFourierImageFilter	Estimate the coefficients in SPF model
CSphericalPolarFourierRadialGenerator	Radial part of general SPF basis
CStructureTensorImageFilter	Computes the structure tensor
CTensorBasisMatrixGenerator	Generate basis matrix
CTrackVisHeaderType
CUnaryFunctorLookUpTable	Use UnaryFunctorLookUpTable to accelerate evaluation of functions
CUnaryFunctorVectorImageFilter	Implements vector-valued generic operation on one image
CVariableLengthVectorImageFileReader	Reads variable length vector image data
CVariableLengthVectorImageFileReaderException	Base exception class for IO conflicts
CVariableLengthVectorImageFileWriter	Writes variable length vector image data. std::vector is used to store the variable length vector
CVectorImageChannelFilter	TInputImage and TOutputImage are VectorImage, TFilter is an image filter which works for itk::Image. This class performs TFilter on each channel of TInputImage, then compose results into output
CVectorImageRegionIterator	A multi-dimensional iterator templated over image type
CVectorImageRegionIterator< Image< TPixel, VImageDimension > >
CVectorImageRegionIteratorWithIndex	A multi-dimensional iterator templated over image type. It provides the same interfaces for both itk::Image<T, N+1> and itk::VectorImage<T, N>
CVectorImageRegionIteratorWithIndex< Image< TPixel, VImageDimension > >
CVectorImageRegionIteratorWithIndex< Image< VariableLengthVector< TPixel >, 3 > >
CVectorImageRegionIteratorWithIndex< SpatiallyDenseSparseVectorImage< TPixel, VImageDimension > >
CVectorImageToMultiVolumeImageFilter	Convert VectorImage<TOutputPixelType, VImageDimension> to Image<TInputPixelType, VImageDimension+1>
CVTKImageDataToImageFilter	Convert VTK image data to an ITK image
►Nsmart_assert
CAssert
Cassert_context
Cis_null_finder
Cis_null_finder< char * >
Cis_null_finder< const char * >
►Nspams
►NFISTA
CComposeProx
CElasticNet
CFusedLasso
CGraphLasso
CGraphLassoRidge
CGraphMult
CGraphPathConv
CGraphPathL0
CGroupLassoL2
CGroupLassoL2_L1
CGroupLassoLINF
CGroupLassoLINF_L1
CGroupProx
CHingeLoss
CLasso
CLassoConstraint
CLogLoss
CLoss
CLossCur
CLossMat
CLossMat< T, LogLoss< T, weighted > >
CLossMat< T, SqLossMissing< T > >
CLossMatSup
CLzero
CMixedL1L2
CMixedL1L2_L1
CMixedL1LINF
CMixedL1LINF_L1
CMixedL1LINFCR
CMultiLogLoss
CNone
CnormL2
CnormLINF
CParamFISTA
CParamReg
CProxMatToVec
CRank
CRegMat
CRegularizer
CRidge
CSpecGraphMat
CSplittingFunction
CSqLoss
CSqLossMat
CSqLossMissing
CTraceNorm
CTreeLasso
CTreeLzero
CTreeMult
CAbstractMatrix	Abstract matrix class
CAbstractMatrixB	Abstract matrix class
CBinaryHeap
CData	Data class, abstract class, useful in the class image
CDoubleRowMatrix	Matrix with shifts
CElement
CGraph
CGraphPath
CGraphPathStruct
CGraphStruct
CList
CListIterator
CMatrix	Dense Matrix class
CMaxFlow
CMinCostFlow
CParamDictLearn
CPath
CProdMatrix	Class representing the product of two matrices
CShiftMatrix	Matrix with shifts
CSpMatrix	Sparse Matrix class
CSpVector	Sparse Vector class
CSubMatrix
CTimer	Class Timer
CTrainer
CTree_Seq
CTreeStruct
CVector	Dense Vector class
►Nstd	STL namespace
Chash< std::vector< T > >
►Nutl
►NFunctor
CAbs
CAbs< utl::NDArray< T, Dim > >
CAcos
CAcos< utl::NDArray< T, Dim > >
CAsin
CAsin< utl::NDArray< T, Dim > >
CAtan
CAtan2
CAtan< utl::NDArray< T, Dim > >
CCompose
CConj
CConj< utl::NDArray< T, Dim > >
CCos
CCos< utl::NDArray< T, Dim > >
CCube
CCube< utl::NDArray< T, Dim > >
CDotProduct
CExp
CExp2
CExp2< utl::NDArray< T, Dim > >
CExp< utl::NDArray< T, Dim > >
CFloor
CFloor< utl::NDArray< T, Dim > >
CInfNorm
CLog
CLog10
CLog10< utl::NDArray< T, Dim > >
CLog2
CLog2< utl::NDArray< T, Dim > >
CLog< utl::NDArray< T, Dim > >
CLRound
CLRound< utl::NDArray< T, Dim > >
CMax
CMaxValue
CMean
CMedian
CMin
CMinValue
CNeg
CNeg< utl::NDArray< T, Dim > >
COneNorm
CPow
CRound
CRound< utl::NDArray< T, Dim > >
CScalarFunctorWrapper
CShred	Obtain a part of a vector
CSign
CSign< utl::NDArray< T, Dim > >
CSin
CSin< utl::NDArray< T, Dim > >
CSqrt
CSqrt< utl::NDArray< T, Dim > >
CSquare
CSquare< utl::NDArray< T, Dim > >
CSum
CTan
CTan< utl::NDArray< T, Dim > >
CTwoNorm
CVectorFunctorBase
CVectorFunctorWrapper
CVectorMultiVariableFunctionWrapper
CVectorUnaryFunctionWrapper
CZeroNorm
►C__InstanceOf
CHelp
CBinaryOpExpr	Binary operator expression class
CBinaryOpExpr< OP, ScalarExprBase< ValueT >, TRight >
CBinaryOpExpr< OP, ScalarExprBase< ValueT1 >, ScalarExprBase< ValueT2 > >
CBinaryOpExpr< OP, TLeft, ScalarExprBase< ValueT > >
CExpr	Base class for expression
CGradientTable	Gradient table related functions and stored tables
CInt_
CNDArray	NDArray is a N-Dimensional array class (row-major, c version)
CNDArray< T, 1 >	NDArray<T,1> is a vector class which uses blas mkl
CNDArray< T, 2 >	NDArray<T,2> is a row-major matrix
CNDArray< T, 4 >	NDArray<T,4> is a 4th order tensor
►CNDArrayBase	Base class for utl::NDArray
CConstReverseIterator	A const reverse iterator through an array
CReverseIterator	A reverse iterator through an array
Cremove_complex	Remove complex:
CScalarExprBase	Scalar expression base class for double and std::complex<double>
CSuperFloatType	Float type which can be coverted to
CSuperset
CUnaryOpExpr	Unary operator expression
►Nvtk
CvtkPolyDataViewer	Helper class to visualize vtkPolyData
CVTKViewer