|
DMRITool
v0.1.1-139-g860d86b4
Diffusion MRI Tool
|
#include <itkMeshFromSphericalFunctionImageFilter.h>
Inheritance diagram for itk::MeshFromSphericalFunctionImageFilter< TInputImage, TOutputMesh >:
Collaboration diagram for itk::MeshFromSphericalFunctionImageFilter< TInputImage, TOutputMesh >:Compute mesh from general spherical function.
Definition at line 35 of file itkMeshFromSphericalFunctionImageFilter.h.
Public Types | |
| typedef SphereTessellatorType::BasicShapeType | BasicShapeType |
| typedef SmartPointer< const Self > | ConstPointer |
| typedef InputImageType::ConstPointer | InputImageConstPointer |
| typedef InputImageType::IndexType | InputImageIndexType |
| typedef InputImageType::PixelType | InputImagePixelType |
| typedef InputImageType::Pointer | InputImagePointer |
| typedef InputImageType::PointType | InputImagePointType |
| typedef InputImageType::RegionType | InputImageRegionType |
| typedef InputImageType::SizeType | InputImageSizeType |
| typedef InputImageType::SizeValueType | InputImageSizeValueType |
| typedef InputImageType::SpacingType | InputImageSpacingType |
| typedef TInputImage | InputImageType |
| typedef Superclass::MatrixPointer | MatrixPointer |
| typedef Superclass::MatrixType | MatrixType |
| enum | NormalizationType { NONE =0, MIN_MAX, UNIT_MAX, UNIT_INTEGRAL } |
| typedef Superclass::OutputMeshCellArrayType | OutputMeshCellArrayType |
| typedef Superclass::OutputMeshPointsType | OutputMeshPointsType |
| typedef Superclass::OutputMeshPolyDataPointer | OutputMeshPolyDataPointer |
| typedef TOutputMesh | OutputMeshPolyDataType |
| typedef Superclass::OutputMeshRGBType | OutputMeshRGBType |
| typedef Superclass::OutputMeshScalarType | OutputMeshScalarType |
| typedef SmartPointer< Self > | Pointer |
| typedef MeshFromSphericalFunctionImageFilter | Self |
| typedef SphereTessellatorType::Pointer | SphereTessellatorPointer |
| typedef SphereTessellator< double > | SphereTessellatorType |
| typedef Superclass::STDVectorPointer | STDVectorPointer |
| typedef Superclass::STDVectorType | STDVectorType |
| typedef MeshFromImageImageFilter< TInputImage, TOutputMesh > | Superclass |
| typedef Superclass::VectorPointer | VectorPointer |
| typedef Superclass::VectorType | VectorType |
Public Types inherited from itk::MeshFromImageImageFilter< TInputImage, TOutputMesh > | |
| enum | ColorSchemeType { UNKNOWN =0, FIXED, DIRECTION, MAGNITUDE } |
| typedef SmartPointer< const Self > | ConstPointer |
| typedef InputImageType::ConstPointer | InputImageConstPointer |
| typedef InputImageType::IndexType | InputImageIndexType |
| typedef InputImageType::PixelType | InputImagePixelType |
| typedef InputImageType::Pointer | InputImagePointer |
| typedef InputImageType::PointType | InputImagePointType |
| typedef InputImageType::RegionType | InputImageRegionType |
| typedef InputImageType::SizeType | InputImageSizeType |
| typedef InputImageType::SizeValueType | InputImageSizeValueType |
| typedef InputImageType::SpacingType | InputImageSpacingType |
| typedef TInputImage | InputImageType |
| typedef utl_shared_ptr< MatrixType > | MatrixPointer |
| typedef utl::NDArray< double, 2 > | MatrixType |
| typedef vtkCellArray | OutputMeshCellArrayType |
| typedef vtkPoints | OutputMeshPointsType |
| typedef vtkSmartPointer< OutputMeshPolyDataType > | OutputMeshPolyDataPointer |
| typedef TOutputMesh | OutputMeshPolyDataType |
| typedef vtkUnsignedCharArray | OutputMeshRGBType |
| typedef vtkDoubleArray | OutputMeshScalarType |
| typedef SmartPointer< Self > | Pointer |
| typedef MeshFromImageImageFilter | Self |
| typedef utl_shared_ptr< STDVectorType > | STDVectorPointer |
| typedef std::vector< double > | STDVectorType |
| typedef MaskedImageToImageFilter< TInputImage, TInputImage > | Superclass |
| typedef utl_shared_ptr< VectorType > | VectorPointer |
| typedef utl::NDArray< double, 1 > | VectorType |
Public Types inherited from itk::MaskedImageToImageFilter< TInputImage, TInputImage > | |
| typedef SmartPointer< const Self > | ConstPointer |
| typedef InputImageType::ConstPointer | InputImageConstPointer |
| typedef InputImageType::IndexType | InputImageIndexType |
| typedef InputImageType::PixelType | InputImagePixelType |
| typedef InputImageType::Pointer | InputImagePointer |
| typedef InputImageType::RegionType | InputImageRegionType |
| typedef InputImageType::SizeType | InputImageSizeType |
| typedef InputImageType::SpacingType | InputImageSpacingType |
| typedef TInputImage | InputImageType |
| typedef LoggerType::Pointer | LoggerPointer |
| typedef ThreadLogger | LoggerType |
| typedef utl_shared_ptr< LoggerVectorType > | LoggerVectorPointer |
| typedef std::vector< LoggerPointer > | LoggerVectorType |
| typedef MaskImageType::Pointer | MaskImagePointer |
| typedef Image< double, 3 > | MaskImageType |
| typedef OutputImageType::IndexType | OutputImageIndexType |
| typedef OutputImageType::PixelType | OutputImagePixelType |
| typedef OutputImageType::Pointer | OutputImagePointer |
| typedef OutputImageType::RegionType | OutputImageRegionType |
| typedef OutputImageType::SizeType | OutputImageSizeType |
| typedef OutputImageType::SpacingType | OutputImageSpacingType |
| typedef TInputImage | OutputImageType |
| typedef SmartPointer< Self > | Pointer |
| typedef MaskedImageToImageFilter | Self |
| typedef ImageToImageFilter< TInputImage, TInputImage > | Superclass |
Public Member Functions | |
| virtual ::itk::LightObject::Pointer | CreateAnother (void) const |
| virtual const char * | GetNameOfClass () const |
| virtual NormalizationType | GetNormalization () |
| unsigned int | GetNumberOfOrientations () const |
| virtual MatrixPointer | GetOrientations () |
| virtual double | GetPow () |
| virtual bool | GetRemoveNegativeValues () |
| virtual void | RemoveNegativeValuesOff () |
| virtual void | RemoveNegativeValuesOn () |
| virtual void | SetNormalization (NormalizationType _arg) |
| virtual void | SetOrientations (MatrixPointer _arg) |
| virtual void | SetPow (double _arg) |
| virtual void | SetRemoveNegativeValues (bool _arg) |
Public Member Functions inherited from itk::MeshFromImageImageFilter< TInputImage, TOutputMesh > | |
| virtual ::itk::LightObject::Pointer | CreateAnother (void) const |
| std::vector< int > | GetBoxView () const |
| virtual ColorSchemeType | GetColorScheme () |
| std::vector< int > | GetFlip () const |
| OutputMeshPolyDataPointer | GetOutput () |
| virtual double | GetScale () |
| std::vector< int > | GetSliceView () const |
| void | SetBoxView (const int x0, const int x1, const int y0, const int y1, const int z0, const int z1) |
| virtual void | SetColorScheme (ColorSchemeType _arg) |
| void | SetFlip (const int flipx, const int flipy, const int flipz) |
| virtual void | SetScale (double _arg) |
| void | SetSliceView (const int coronal, const int sagittal, const int transverse) |
Public Member Functions inherited from itk::MaskedImageToImageFilter< TInputImage, TInputImage > | |
| virtual ::itk::LightObject::Pointer | CreateAnother (void) const |
| virtual const LoggerType * | GetLogger () const |
| virtual const MaskImageType * | GetMaskImage () const |
| bool | IsMaskUsed () |
| itkGetObjectMacro (MaskImage, MaskImageType) | |
| itkGetObjectMacro (Logger, LoggerType) | |
| itkSetGetMacro (LogLevel, int) | |
| virtual void | SetLogger (LoggerType *_arg) |
| virtual void | SetMaskImage (MaskImageType *_arg) |
| void | SetMaskImage (const std::string &file) |
Static Public Member Functions | |
| static Pointer | New () |
Static Public Member Functions inherited from itk::MeshFromImageImageFilter< TInputImage, TOutputMesh > | |
| static Pointer | New () |
Static Public Member Functions inherited from itk::MaskedImageToImageFilter< TInputImage, TInputImage > | |
| static Pointer | New () |
Protected Attributes | |
| NormalizationType | m_Normalization |
| MatrixPointer | m_Orientations |
| double | m_Pow |
| bool | m_RemoveNegativeValues |
Protected Attributes inherited from itk::MeshFromImageImageFilter< TInputImage, TOutputMesh > | |
| std::vector< int > | m_BoxView = std::vector<int>(6,-1) |
| ColorSchemeType | m_ColorScheme =UNKNOWN |
| std::vector< int > | m_Flip = std::vector<int>(3, 0) |
| OutputMeshPolyDataPointer | m_Mesh = OutputMeshPolyDataType::New() |
| double | m_Scale =1.0 |
| std::vector< int > | m_SliceView = std::vector<int>(3,-1) |
Protected Attributes inherited from itk::MaskedImageToImageFilter< TInputImage, TInputImage > | |
| LoggerPointer | m_Logger |
| LoggerVectorPointer | m_LoggerVector |
| int | m_LogLevel |
| MaskImagePointer | m_MaskImage |
| int | m_ThreadID |
Private Member Functions | |
| MeshFromSphericalFunctionImageFilter (const Self &) | |
| void | operator= (const Self &) |
Additional Inherited Members | |
Static Public Attributes inherited from itk::MeshFromImageImageFilter< TInputImage, TOutputMesh > | |
| static const unsigned int | OrientationDimension = 3 |
Static Public Attributes inherited from itk::MaskedImageToImageFilter< TInputImage, TInputImage > | |
| static const unsigned int | InputImageDimension |
| static const unsigned int | OutputImageDimension |
| typedef SphereTessellatorType::BasicShapeType itk::MeshFromSphericalFunctionImageFilter< TInputImage, TOutputMesh >::BasicShapeType |
Definition at line 75 of file itkMeshFromSphericalFunctionImageFilter.h.
| typedef SmartPointer<const Self> itk::MeshFromSphericalFunctionImageFilter< TInputImage, TOutputMesh >::ConstPointer |
Definition at line 43 of file itkMeshFromSphericalFunctionImageFilter.h.
| typedef InputImageType::ConstPointer itk::MeshFromSphericalFunctionImageFilter< TInputImage, TOutputMesh >::InputImageConstPointer |
Definition at line 54 of file itkMeshFromSphericalFunctionImageFilter.h.
| typedef InputImageType::IndexType itk::MeshFromSphericalFunctionImageFilter< TInputImage, TOutputMesh >::InputImageIndexType |
Definition at line 55 of file itkMeshFromSphericalFunctionImageFilter.h.
| typedef InputImageType::PixelType itk::MeshFromSphericalFunctionImageFilter< TInputImage, TOutputMesh >::InputImagePixelType |
Definition at line 59 of file itkMeshFromSphericalFunctionImageFilter.h.
| typedef InputImageType::Pointer itk::MeshFromSphericalFunctionImageFilter< TInputImage, TOutputMesh >::InputImagePointer |
Definition at line 53 of file itkMeshFromSphericalFunctionImageFilter.h.
| typedef InputImageType::PointType itk::MeshFromSphericalFunctionImageFilter< TInputImage, TOutputMesh >::InputImagePointType |
Definition at line 61 of file itkMeshFromSphericalFunctionImageFilter.h.
| typedef InputImageType::RegionType itk::MeshFromSphericalFunctionImageFilter< TInputImage, TOutputMesh >::InputImageRegionType |
Definition at line 60 of file itkMeshFromSphericalFunctionImageFilter.h.
| typedef InputImageType::SizeType itk::MeshFromSphericalFunctionImageFilter< TInputImage, TOutputMesh >::InputImageSizeType |
Definition at line 56 of file itkMeshFromSphericalFunctionImageFilter.h.
| typedef InputImageType::SizeValueType itk::MeshFromSphericalFunctionImageFilter< TInputImage, TOutputMesh >::InputImageSizeValueType |
Definition at line 57 of file itkMeshFromSphericalFunctionImageFilter.h.
| typedef InputImageType::SpacingType itk::MeshFromSphericalFunctionImageFilter< TInputImage, TOutputMesh >::InputImageSpacingType |
Definition at line 58 of file itkMeshFromSphericalFunctionImageFilter.h.
| typedef TInputImage itk::MeshFromSphericalFunctionImageFilter< TInputImage, TOutputMesh >::InputImageType |
Definition at line 49 of file itkMeshFromSphericalFunctionImageFilter.h.
| typedef Superclass::MatrixPointer itk::MeshFromSphericalFunctionImageFilter< TInputImage, TOutputMesh >::MatrixPointer |
Definition at line 79 of file itkMeshFromSphericalFunctionImageFilter.h.
| typedef Superclass::MatrixType itk::MeshFromSphericalFunctionImageFilter< TInputImage, TOutputMesh >::MatrixType |
Orientation Matrices
Definition at line 78 of file itkMeshFromSphericalFunctionImageFilter.h.
| typedef Superclass::OutputMeshCellArrayType itk::MeshFromSphericalFunctionImageFilter< TInputImage, TOutputMesh >::OutputMeshCellArrayType |
Definition at line 66 of file itkMeshFromSphericalFunctionImageFilter.h.
| typedef Superclass::OutputMeshPointsType itk::MeshFromSphericalFunctionImageFilter< TInputImage, TOutputMesh >::OutputMeshPointsType |
Definition at line 65 of file itkMeshFromSphericalFunctionImageFilter.h.
| typedef Superclass::OutputMeshPolyDataPointer itk::MeshFromSphericalFunctionImageFilter< TInputImage, TOutputMesh >::OutputMeshPolyDataPointer |
Definition at line 67 of file itkMeshFromSphericalFunctionImageFilter.h.
| typedef TOutputMesh itk::MeshFromSphericalFunctionImageFilter< TInputImage, TOutputMesh >::OutputMeshPolyDataType |
Definition at line 63 of file itkMeshFromSphericalFunctionImageFilter.h.
| typedef Superclass::OutputMeshRGBType itk::MeshFromSphericalFunctionImageFilter< TInputImage, TOutputMesh >::OutputMeshRGBType |
Definition at line 69 of file itkMeshFromSphericalFunctionImageFilter.h.
| typedef Superclass::OutputMeshScalarType itk::MeshFromSphericalFunctionImageFilter< TInputImage, TOutputMesh >::OutputMeshScalarType |
Definition at line 68 of file itkMeshFromSphericalFunctionImageFilter.h.
| typedef SmartPointer<Self> itk::MeshFromSphericalFunctionImageFilter< TInputImage, TOutputMesh >::Pointer |
Definition at line 42 of file itkMeshFromSphericalFunctionImageFilter.h.
| typedef MeshFromSphericalFunctionImageFilter itk::MeshFromSphericalFunctionImageFilter< TInputImage, TOutputMesh >::Self |
Standard class typedefs.
Definition at line 40 of file itkMeshFromSphericalFunctionImageFilter.h.
| typedef SphereTessellatorType::Pointer itk::MeshFromSphericalFunctionImageFilter< TInputImage, TOutputMesh >::SphereTessellatorPointer |
Definition at line 74 of file itkMeshFromSphericalFunctionImageFilter.h.
| typedef SphereTessellator<double> itk::MeshFromSphericalFunctionImageFilter< TInputImage, TOutputMesh >::SphereTessellatorType |
Set/Get the min-max normalization
Definition at line 73 of file itkMeshFromSphericalFunctionImageFilter.h.
| typedef Superclass::STDVectorPointer itk::MeshFromSphericalFunctionImageFilter< TInputImage, TOutputMesh >::STDVectorPointer |
Definition at line 83 of file itkMeshFromSphericalFunctionImageFilter.h.
| typedef Superclass::STDVectorType itk::MeshFromSphericalFunctionImageFilter< TInputImage, TOutputMesh >::STDVectorType |
Definition at line 82 of file itkMeshFromSphericalFunctionImageFilter.h.
| typedef MeshFromImageImageFilter<TInputImage, TOutputMesh> itk::MeshFromSphericalFunctionImageFilter< TInputImage, TOutputMesh >::Superclass |
Definition at line 41 of file itkMeshFromSphericalFunctionImageFilter.h.
| typedef Superclass::VectorPointer itk::MeshFromSphericalFunctionImageFilter< TInputImage, TOutputMesh >::VectorPointer |
Definition at line 81 of file itkMeshFromSphericalFunctionImageFilter.h.
| typedef Superclass::VectorType itk::MeshFromSphericalFunctionImageFilter< TInputImage, TOutputMesh >::VectorType |
Definition at line 80 of file itkMeshFromSphericalFunctionImageFilter.h.
| enum itk::MeshFromSphericalFunctionImageFilter::NormalizationType |
Normalization type
| Enumerator | |
|---|---|
| NONE | |
| MIN_MAX | |
| UNIT_MAX | |
| UNIT_INTEGRAL | |
Definition at line 86 of file itkMeshFromSphericalFunctionImageFilter.h.
|
inlineprotected |
Definition at line 110 of file itkMeshFromSphericalFunctionImageFilter.h.
References spams::FISTA::NONE.
|
inlineprotected |
Definition at line 121 of file itkMeshFromSphericalFunctionImageFilter.h.
|
private |
| virtual::itk::LightObject::Pointer itk::MeshFromSphericalFunctionImageFilter< TInputImage, TOutputMesh >::CreateAnother | ( | void | ) | const |
|
virtual |
Run-time type information (and related methods)
Reimplemented from itk::MeshFromImageImageFilter< TInputImage, TOutputMesh >.
Reimplemented in itk::MeshFromContinuousSphericalFunctionImageFilter< TInputImage, TOutputMesh >, itk::MeshFromDiscreteFiberODFImageFilter< TInputImage, TOutputMesh >, itk::MeshFromSphericalFunctionTessellatedSamplesImageFilter< TInputImage, TOutputMesh >, and itk::MeshFromSHCoefficientsImageFilter< TInputImage, TOutputMesh >.
|
virtual |
|
inline |
Definition at line 103 of file itkMeshFromSphericalFunctionImageFilter.h.
|
virtual |
|
virtual |
|
virtual |
|
inlineprotected |
Definition at line 131 of file itkMeshFromSphericalFunctionImageFilter.h.
|
static |
Method for creation through the object factory.
|
private |
|
inlineprotectedvirtual |
Reimplemented from itk::MeshFromImageImageFilter< TInputImage, TOutputMesh >.
Reimplemented in itk::MeshFromSphericalFunctionTessellatedSamplesImageFilter< TInputImage, TOutputMesh >.
Definition at line 124 of file itkMeshFromSphericalFunctionImageFilter.h.
References spams::FISTA::NONE, PrintEnum4, utl::PrintUtlMatrix(), and PrintVar.
Here is the call graph for this function:
|
virtual |
|
virtual |
|
virtual |
Set/Get whether and how to do normalization
|
virtual |
|
virtual |
Set/Get pow factor
|
virtual |
Set/Get whether to remove negative values
|
protected |
Definition at line 159 of file itkMeshFromSphericalFunctionImageFilter.h.
|
protected |
Definition at line 157 of file itkMeshFromSphericalFunctionImageFilter.h.
|
protected |
Definition at line 155 of file itkMeshFromSphericalFunctionImageFilter.h.
|
protected |
Definition at line 153 of file itkMeshFromSphericalFunctionImageFilter.h.
1.8.11