#include <itkDiscreteBasisMatrixGenerator.h>

Inheritance diagram for itk::DiscreteBasisMatrixGenerator< TElement >:

Collaboration diagram for itk::DiscreteBasisMatrixGenerator< TElement >:

Detailed Description

template<typename TElement = double>
class itk::DiscreteBasisMatrixGenerator< TElement >

Generate basis matrix.

Author: Jian Cheng (jian..nosp@m.chen.nosp@m.g.198.nosp@m.3@gm.nosp@m.ail.c.nosp@m.om)

Definition at line 36 of file itkDiscreteBasisMatrixGenerator.h.

Public Types
typedef SmartPointer< const Self >	ConstPointer

typedef Superclass::MatrixPointer	MatrixPointer

typedef Superclass::MatrixType	MatrixType

typedef SmartPointer< Self >	Pointer

typedef DiscreteBasisMatrixGenerator	Self

typedef Superclass::STDVectorPointer	STDVectorPointer

typedef Superclass::STDVectorType	STDVectorType

typedef BasisMatrixGenerator< TElement >	Superclass

typedef Superclass::VectorPointer	VectorPointer

typedef Superclass::VectorType	VectorType

Public Types inherited from itk::BasisMatrixGenerator< TElement >
typedef SmartPointer< const Self >	ConstPointer

typedef utl_shared_ptr< MatrixType >	MatrixPointer

typedef utl::NDArray< double, 2 >	MatrixType

enum	OutputType { DWI =0, EAP, ODF }

typedef SmartPointer< Self >	Pointer

typedef SamplingSchemeQSpaceType::Pointer	SamplingSchemeQSpacePointer

typedef SamplingSchemeQSpace< double >	SamplingSchemeQSpaceType

typedef SamplingSchemeRSpaceType::Pointer	SamplingSchemeRSpacePointer

typedef SamplingScheme3D< double >	SamplingSchemeRSpaceType

typedef BasisMatrixGenerator	Self

typedef utl_shared_ptr< STDVectorType >	STDVectorPointer

typedef std::vector< double >	STDVectorType

typedef Object	Superclass

typedef utl_shared_ptr< VectorType >	VectorPointer

typedef utl::NDArray< double, 1 >	VectorType

Public Member Functions
virtual ::itk::LightObject::Pointer	CreateAnother (void) const

void	Flip (const int flipx, const int flipy, const int flipz) override

virtual MatrixPointer	GetBasisOrientations ()

virtual const char *	GetNameOfClass () const

int	GetNumberOfBasis () const override

virtual bool	GetUseIsotropicTerm ()

virtual void	SetBasisOrientations (MatrixPointer _arg)

virtual void	SetUseIsotropicTerm (bool _arg)

virtual void	UseIsotropicTermOff ()

virtual void	UseIsotropicTermOn ()

Public Member Functions inherited from itk::BasisMatrixGenerator< TElement >
virtual void	ComputeBasisMatrix ()

virtual ::itk::LightObject::Pointer	CreateAnother (void) const

virtual MatrixPointer	GetBasisMatrix () const

virtual double	GetMD0 ()

virtual int	GetNumberOfSamples () const

virtual int	GetODFOrder ()

virtual OutputType	GetOutputType ()

virtual MatrixPointer	GetQBasisMatrixForDWI ()

virtual MatrixPointer	GetRBasisMatrixForEAP ()

virtual MatrixPointer	GetRBasisMatrixForODF ()

	itkGetObjectMacro (SamplingSchemeQSpace, SamplingSchemeQSpaceType)

	itkGetObjectMacro (SamplingSchemeRSpace, SamplingSchemeRSpaceType)

virtual void	SetMD0 (double _arg)

virtual void	SetODFOrder (int _arg)

virtual void	SetOutputType (OutputType _arg)

virtual void	SetSamplingSchemeQSpace (SamplingSchemeQSpaceType *_arg)

virtual void	SetSamplingSchemeRSpace (SamplingSchemeRSpaceType *_arg)

Static Public Member Functions
static Pointer	New ()

Static Public Member Functions inherited from itk::BasisMatrixGenerator< TElement >
static Pointer	New ()

Protected Member Functions
	DiscreteBasisMatrixGenerator ()

LightObject::Pointer	InternalClone () const ITK_OVERRIDE

void	PrintSelf (std::ostream &os, Indent indent) const ITK_OVERRIDE

virtual void	VerifyInputParameters () const ITK_OVERRIDE

virtual	~DiscreteBasisMatrixGenerator ()

Protected Member Functions inherited from itk::BasisMatrixGenerator< TElement >
	BasisMatrixGenerator ()

LightObject::Pointer	InternalClone () const ITK_OVERRIDE

void	PrintSelf (std::ostream &os, Indent indent) const ITK_OVERRIDE

virtual	~BasisMatrixGenerator ()

Protected Attributes
MatrixPointer	m_BasisOrientations

bool	m_UseIsotropicTerm

Protected Attributes inherited from itk::BasisMatrixGenerator< TElement >
double	m_MD0

int	m_ODFOrder

OutputType	m_OutputType

MatrixPointer	m_QBasisMatrixForDWI

MatrixPointer	m_RBasisMatrixForEAP

MatrixPointer	m_RBasisMatrixForODF

SamplingSchemeQSpacePointer	m_SamplingSchemeQSpace

SamplingSchemeRSpacePointer	m_SamplingSchemeRSpace

Private Member Functions
	DiscreteBasisMatrixGenerator (const Self &)

void	operator= (const Self &)

Member Typedef Documentation

template<typename TElement = double>

typedef SmartPointer<const Self> itk::DiscreteBasisMatrixGenerator< TElement >::ConstPointer

Definition at line 44 of file itkDiscreteBasisMatrixGenerator.h.

template<typename TElement = double>

typedef Superclass::MatrixPointer itk::DiscreteBasisMatrixGenerator< TElement >::MatrixPointer

Definition at line 55 of file itkDiscreteBasisMatrixGenerator.h.

template<typename TElement = double>

typedef Superclass::MatrixType itk::DiscreteBasisMatrixGenerator< TElement >::MatrixType

Save the template parameters.

Definition at line 50 of file itkDiscreteBasisMatrixGenerator.h.

template<typename TElement = double>

typedef SmartPointer<Self> itk::DiscreteBasisMatrixGenerator< TElement >::Pointer

Definition at line 43 of file itkDiscreteBasisMatrixGenerator.h.

template<typename TElement = double>

typedef DiscreteBasisMatrixGenerator itk::DiscreteBasisMatrixGenerator< TElement >::Self

Standard class typedefs.

Definition at line 41 of file itkDiscreteBasisMatrixGenerator.h.

template<typename TElement = double>

typedef Superclass::STDVectorPointer itk::DiscreteBasisMatrixGenerator< TElement >::STDVectorPointer

Definition at line 58 of file itkDiscreteBasisMatrixGenerator.h.

template<typename TElement = double>

typedef Superclass::STDVectorType itk::DiscreteBasisMatrixGenerator< TElement >::STDVectorType

Definition at line 57 of file itkDiscreteBasisMatrixGenerator.h.

template<typename TElement = double>

typedef BasisMatrixGenerator<TElement> itk::DiscreteBasisMatrixGenerator< TElement >::Superclass

Definition at line 42 of file itkDiscreteBasisMatrixGenerator.h.

template<typename TElement = double>

typedef Superclass::VectorPointer itk::DiscreteBasisMatrixGenerator< TElement >::VectorPointer

Definition at line 56 of file itkDiscreteBasisMatrixGenerator.h.

template<typename TElement = double>

typedef Superclass::VectorType itk::DiscreteBasisMatrixGenerator< TElement >::VectorType

Definition at line 54 of file itkDiscreteBasisMatrixGenerator.h.

Constructor & Destructor Documentation

template<typename TElement >

itk::DiscreteBasisMatrixGenerator< TElement >::DiscreteBasisMatrixGenerator ( )

protected

Definition at line 28 of file itkDiscreteBasisMatrixGenerator.hxx.

References itk::DiscreteBasisMatrixGenerator< TElement >::InternalClone().

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template<typename TElement = double>

virtual itk::DiscreteBasisMatrixGenerator< TElement >::~DiscreteBasisMatrixGenerator ( )

inlineprotectedvirtual

Definition at line 87 of file itkDiscreteBasisMatrixGenerator.h.

References ITK_OVERRIDE.

template<typename TElement = double>

itk::DiscreteBasisMatrixGenerator< TElement >::DiscreteBasisMatrixGenerator ( const Self & )

private

Member Function Documentation

template<typename TElement = double>

virtual::itk::LightObject::Pointer itk::DiscreteBasisMatrixGenerator< TElement >::CreateAnother ( void ) const

template<typename TElement = double>

void itk::DiscreteBasisMatrixGenerator< TElement >::Flip	(	const int	flipx,
		const int	flipy,
		const int	flipz
	)

inlineoverridevirtual

Reimplemented from itk::BasisMatrixGenerator< TElement >.

Definition at line 76 of file itkDiscreteBasisMatrixGenerator.h.

References utl::FlipOrientations().

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template<typename TElement = double>

virtual MatrixPointer itk::DiscreteBasisMatrixGenerator< TElement >::GetBasisOrientations ( )

virtual

template<typename TElement = double>

virtual const char* itk::DiscreteBasisMatrixGenerator< TElement >::GetNameOfClass ( ) const

virtual

Standard part of every itk Object.

Reimplemented from itk::BasisMatrixGenerator< TElement >.

Reimplemented in itk::TensorBasisMatrixGenerator< TElement >.

template<typename TElement = double>

int itk::DiscreteBasisMatrixGenerator< TElement >::GetNumberOfBasis ( ) const

inlineoverridevirtual

Reimplemented from itk::BasisMatrixGenerator< TElement >.

Definition at line 63 of file itkDiscreteBasisMatrixGenerator.h.

template<typename TElement = double>

virtual bool itk::DiscreteBasisMatrixGenerator< TElement >::GetUseIsotropicTerm ( )

virtual

template<typename TElement >

LightObject::Pointer itk::DiscreteBasisMatrixGenerator< TElement >::InternalClone ( ) const

protected

Definition at line 37 of file itkDiscreteBasisMatrixGenerator.hxx.

References itk::DiscreteBasisMatrixGenerator< TElement >::PrintSelf(), and utlShowPosition.

Referenced by itk::DiscreteBasisMatrixGenerator< TElement >::DiscreteBasisMatrixGenerator().

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template<typename TElement = double>

static Pointer itk::DiscreteBasisMatrixGenerator< TElement >::New ( )

static

Method for creation through the object factory.

template<typename TElement = double>

void itk::DiscreteBasisMatrixGenerator< TElement >::operator= ( const Self & )

private

template<typename TElement >

void itk::DiscreteBasisMatrixGenerator< TElement >::PrintSelf	(	std::ostream &	os,
		Indent	indent
	)		const

protected

Definition at line 55 of file itkDiscreteBasisMatrixGenerator.hxx.

References utl::PrintUtlMatrix(), PrintVar1, and itk::DiscreteBasisMatrixGenerator< TElement >::VerifyInputParameters().

Referenced by itk::DiscreteBasisMatrixGenerator< TElement >::InternalClone().

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template<typename TElement = double>

virtual void itk::DiscreteBasisMatrixGenerator< TElement >::SetBasisOrientations ( MatrixPointer _arg )

virtual

template<typename TElement = double>

virtual void itk::DiscreteBasisMatrixGenerator< TElement >::SetUseIsotropicTerm ( bool _arg )

virtual

Some parameters

template<typename TElement = double>

virtual void itk::DiscreteBasisMatrixGenerator< TElement >::UseIsotropicTermOff ( )

virtual

template<typename TElement = double>

virtual void itk::DiscreteBasisMatrixGenerator< TElement >::UseIsotropicTermOn ( )

virtual

template<typename TElement >

void itk::DiscreteBasisMatrixGenerator< TElement >::VerifyInputParameters ( ) const

protectedvirtual

Reimplemented from itk::BasisMatrixGenerator< TElement >.

Reimplemented in itk::TensorBasisMatrixGenerator< TElement >.

Definition at line 66 of file itkDiscreteBasisMatrixGenerator.hxx.

References utlGlobalException.

Referenced by itk::DiscreteBasisMatrixGenerator< TElement >::PrintSelf().

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Member Data Documentation

template<typename TElement = double>

MatrixPointer itk::DiscreteBasisMatrixGenerator< TElement >::m_BasisOrientations

protected

Definition at line 97 of file itkDiscreteBasisMatrixGenerator.h.

template<typename TElement = double>

bool itk::DiscreteBasisMatrixGenerator< TElement >::m_UseIsotropicTerm

protected

Definition at line 95 of file itkDiscreteBasisMatrixGenerator.h.

The documentation for this class was generated from the following files:

Modules/DiffusionModels/include/itkDiscreteBasisMatrixGenerator.h
Modules/DiffusionModels/include/itkDiscreteBasisMatrixGenerator.hxx

Detailed Description

template<typename TElement = double> class itk::DiscreteBasisMatrixGenerator< TElement >

Public Types

Public Member Functions

Static Public Member Functions

Protected Member Functions

Protected Attributes

Private Member Functions

Member Typedef Documentation

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation

template<typename TElement = double>
class itk::DiscreteBasisMatrixGenerator< TElement >