USAGE:
ComputeSHCoefficientsOfDWIFromSymmetricTensor [--returnparameterfile
<std::string>]
[--processinformationaddress
<std::string>] [--xml] [--echo]
[--nob] [--allsh] [--sh <int>]
[--bvalues <std::vector<double>>]
[--famd <std::vector<double>>]
[--eigenvalues
<std::vector<double>>] [--output
<std::string>] [--] [--version]
[-h]
Where:
--returnparameterfile <std::string>
Filename in which to write simple return parameters (int, float,
int-vector, etc.) as opposed to bulk return parameters (image,
geometry, transform, measurement, table).
--processinformationaddress <std::string>
Address of a structure to store process information (progress, abort,
etc.). (value: 0)
--xml
Produce xml description of command line arguments (value: 0)
--echo
Echo the command line arguments (value: 0)
--nob
If it is set, only print SH coefficients without b values. (value: 0)
--allsh
If it is set, output all coefficients including zeros for c_{l,m},
m!=0. If not set, output only c_{l,0} (value: 0)
--sh <int>
SH order. (value: 8)
--bvalues <std::vector<double>>
B value.
--famd <std::vector<double>>
FA and Mean Diffusivity (MD) for symmetric tensor.
--eigenvalues <std::vector<double>>
Two eigenvalues for symmetric tensor.
--output <std::string>
Output SH coefficients into the file. If not set, output to screen.
--, --ignore_rest
Ignores the rest of the labeled arguments following this flag.
--version
Displays version information and exits.
-h, --help
Displays usage information and exits.
Description: Compute SH coefficients of DWI signal in DTI with symmetric
tensor (along z-axis).
Examples:
ComputeSHCoefficientsOfDWIFromSymmetricTensor --sh 4 --bvalues 1000
--famd 0.9,0.7e-3
ComputeSHCoefficientsOfDWIFromSymmetricTensor --sh 4 --bvalues 1000
--famd 0.9,0.7e-3 --nob
ComputeSHCoefficientsOfDWIFromSymmetricTensor --sh 4 --bvalues 1000
--eigenvalues 1.7e-3,0.3e-3
Author(s): Jian Cheng (jian.cheng.1983@gmail.com)
Acknowledgements: Thank you everyone.