Matlab Function List¶

Table of Contents

Common ¶

Command	Description
mexITKImageWrite	write Matlab image matrix to any image format supported by ITK using itk::Image and itk::VectorImage.
mexITKImageRead	read images stored as any format recognized by ITK

Command	Description
mexReadDWIList	read dwi images, gradient files, and b values

Command	Description
mexSphericalPolarFourierImaging	estimate continuous DWI signal and EAP represented by coefficients of given basis.
mexGetSHBasisMatrix	get sh matrix based on given order and orientationMatrix
mexGetSamplesFromSPFCoefficients	get DWI or EAP samples (orignal samples or the SH coefficients) from given SPF coefficients
mexGetSPFBasisMatrix	get SPF basis matrix with given spherical and radial orders, orientationMatrix, bVector

Command	Description
CartesianToSpherical	Convert x,y,z to theta, phi, r.
CoveringRadius	Calculate the covering radius of the given samples.
CoveringRadiusUpperBound	calculate the upper bound () of the minimal distance for a given number of points. Note: for N antipodal symmetric samples, use CoveringRadiusUpperBound(2*N).
GetGradAllShells	Get Nx3 gradient table from gradients in all shells.
OptimalSamplingMultiShellCNLO	update gradients from an initial gradient set, such that the updated gradients are evenly distributed.
OptimalSamplingMultiShellCNLO_singleRun	update gradients from an initial gradient set, such that the updated gradients are evenly distributed.
OptimalSamplingMultiSubsetsFromDifferentSets	get K subsets of gradients from corresponding K given gradient sets, such that gradients in each subset are evenly distributed.
OptimalSamplingMultiSubsetsFromSameSet	get K subsets of gradients from one given gradient set, such that gradients in each subset are evenly distributed.
OptimalSamplingSingleShellCNLO	update gradients from an initial gradient set, such that the updated gradients are evenly distributed.
OptimalSamplingSingleSubset	get several subsets of gradients from a given gradient set, such that gradients in each subset are evenly distributed.
ReadDirections	read direction file into a matrix
VisualizeMultiShellScheme	visualize single or multiple shell schemes
WriteDirections	Write gradient table to a file
mexReadGrad	read gradient files into a matrix

Command	Description
CopyDefaultStructParams	Copy default parameter struct into a given user parameter struct