USAGE:
SamplingSchemeQSpaceIncrementalEstimation [--returnparameterfile
<std::string>]
[--processinformationaddress
<std::string>] [--xml] [--echo]
[--debug] [--elecOrder <double>]
[--weight <double>] [--criteria
<DISTANCE|ELECTROSTATIC>]
[--tessOrder <int>]
[--initialOrientations
<std::string>] [--fineOrientations
<std::string>] [--numberOfSamples
<std::vector<int>>] [--]
[--version] [-h] <std::string>
Where:
--returnparameterfile <std::string>
Filename in which to write simple return parameters (int, float,
int-vector, etc.) as opposed to bulk return parameters (image,
geometry, transform, measurement, table).
--processinformationaddress <std::string>
Address of a structure to store process information (progress, abort,
etc.). (value: 0)
--xml
Produce xml description of command line arguments (value: 0)
--echo
Echo the command line arguments (value: 0)
--debug
debug (value: 0)
--elecOrder <double>
order for the calculation of Electrostatic energy. (value: 2)
--weight <double>
Weight for single shell term, 1-weight for mutiple shell term. (value:
0.5)
--criteria <DISTANCE|ELECTROSTATIC>
Criteria Type. (value: DISTANCE)
--tessOrder <int>
Tessellation order for the fine orientations. (value: 7)
--initialOrientations <std::string>
A given orientations for an intialization.
--fineOrientations <std::string>
A given fine orientations. It overrides --tessOrder
--numberOfSamples <std::vector<int>>
number of samples in single/multiple shells.
--, --ignore_rest
Ignores the rest of the labeled arguments following this flag.
--version
Displays version information and exits.
-h, --help
Displays usage information and exits.
<std::string>
(required) Output orientation file(s), single shell or multiple
shells.
Description: Incrementatl estimation for single and multiple shell
sampling scheme.
Examples:
SamplingSchemeQSpaceIncrementalEstimation grad_90_ISC.txt
--numberOfSamples 90
SamplingSchemeQSpaceIncrementalEstimation grad_90x3_ISC.txt
--numberOfSamples 90,90,90
Reference:
Jian Cheng, Dinggang Shen, Pew-Thian Yap, Peter J. Basser, 'Single- and
Multiple-Shell Uniform Sampling Schemes for Diffusion MRI Using
Spherical Codes', IEEE Transactions on Medical Imaging (TMI),
2017.
Author(s): Jian Cheng (jian.cheng.1983@gmail.com)
Acknowledgements: Thank you everyone.